Publications

Douaki, A., S. Weng, G. Lanzavecchia, A. Sapunova, A. Stuber, G. Nanni, N. Nakatsuka, M. Tsutsui, K. Yokota, R. Krahne, and D. Garoli

Adv. Opt. Mater., 2025. 13

Universal Click-Chemistry Approach for the DNA Functionalization of Nanoparticles

Siegel, N., H. Hasebe, G. Chiarelli, D. Garoli, H. Sugimoto, M. Fujii, G.P. Acuna, and K. Kołątaj

J. Am. Chem. Soc., 2024. 146, 17250-17260

Investigation of Ion Transport in Solid-State Nanopores with Different Properties Using Comsol Modeling

Sapunova, A., L. Lin, S. Weng, G. Lanzavecchia, A. Douaki, and R. Krahne

In Proceedings of SPIE - The International Society for Optical Engineering

Biomolecular Ligands as Tools to Modulate the Optical and Chiroptical Properties of Gold Nanoclusters

Saa, L., M. Núñez-Martínez, E. Carpintero-Cueto, and A.L. Cortajarena

Nanoscale, 2024. 17, 3671-3687

Chemical Annealing Restructures Rna for Nanopore Detection

Platnich, C.M., M.K. Earle, and U.F. Keyser

J. Am. Chem. Soc., 2024. 146, 12919-12924

Chemical Unclonable Functions Based on Operable Random DNA Pools

Luescher, A.M., A.L. Gimpel, W.J. Stark, R. Heckel, and R.N. Grass

Nat. Commun., 2024. 15

Challenges for Error-Correction Coding in DNA Data Storage: Photolithographic Synthesis and DNA Decay

Gimpel, A.L., W.J. Stark, R. Heckel, and R.N. Grass

Digit. Discov., 2024. 3, 2497-2508

Dry Synthesis of Bi-Layer Nanoporous Metal Films as Plasmonic Metamaterial

Caligiuri, V., H. Kwon, A. Griesi, Y.P. Ivanov, A. Schirato, A. Alabastri, M. Cuscunà, G. Balestra, A. De Luca, T. Tapani, H. Lin, N. Maccaferri, R. Krahne, G. Divitini, P. Fischer, and D. Garoli

Nanophotonics, 2024. 13, 1159-1167

Recent Advances in DNA Origami-Engineered Nanomaterials and Applications

Zhan, P., A. Peil, Q. Jiang, D. Wang, S. Mousavi, Q. Xiong, Q. Shen, Y. Shang, B. Ding, C. Lin, Y. Ke, and N. Liu

Chem. Rev., 2023. 123, 3976-4050

Modulating Lipid Membrane Morphology by Dynamic DNA Origami Networks

Yang, J., K. Jahnke, L. Xin, X. Jing, P. Zhan, A. Peil, A. Griffo, M. Škugor, D. Yang, S. Fan, K. Göpfrich, H. Yan, P. Wang, and N. Liu

Nano Lett., 2023. 23, 6330-6336

Neurotransmitter Sensing Via Ionic Flux Modulation through Aptamer Conformational Rearrangement

Stuber, A., A. Douaki, J. Hengsteler, D. Buckingham, D. Momotenko, D. Garoli, and N. Nakatsuka

in International Conference on Metamaterials, Photonic Crystals and Plasmonics. 2023.

Aptamer Conformational Dynamics Modulate Neurotransmitter Sensing in Nanopores

Stuber, A., A. Douaki, J. Hengsteler, D. Buckingham, D. Momotenko, D. Garoli, and N. Nakatsuka

ACS Nano, 2023. 17, 19168-19179

Transformable Plasmonic Helix with Swinging Gold Nanoparticles

Peil, A., P. Zhan, X. Duan, R. Krahne, D. Garoli, L. M. Liz-Marzán, and N. Liu

Angew. Chem. Int. Ed., 2023. 62

DNA Volume, Topology, and Flexibility Dictate Nanopore Current Signals

Li, Y., S.E. Sandler, U.F. Keyser, and J. Zhu

Nano Lett., 2023. 23, 7054-7061

Plasmonic Photochemistry as a Tool to Prepare Metallic Nanopores with Controlled Diameter for Optimized detection of single entities

German Lanzavecchia, Joel Kuttruff, Andrea Doricchi, Ali Douaki, Krishnadas Kumaranchira Ramankutty, Isabel García, Lyuye Lin, Alba Viejo Rodríguez, Thomas Wågberg, Roman Krahne, Nicolò Maccaferri, Denis Garoli

Advanced Optical Materials, 11, 2300786 (2023)

Advances in Ultrafast Plasmonics

Koya, A.N., M. Romanelli, J. Kuttruff, N. Henriksson, A. Stefancu, G. Grinblat, A. De Andres, F. Schnur, M. Vanzan, M. Marsili, M. Rahaman, A. Viejo Rodríguez, T. Tapani, H. Lin, B.D. Dana, J. Lin, G. Barbillon, R. Proietti Zaccaria, D. Brida, D. Jariwala, L. Veisz, E. Cortés, S. Corni, D. Garoli, and N. Maccaferri

Appl. Phys. Rev., 2023. 10.

A digital twin for DNA data storage based on comprehensive quantification of errors and biases

Andreas L Gimpel, Wendelin J Stark, Reinhard Heckel, Robert N Grass

Nature Communications volume 14, Article number: 6026 (2023)

Detection of Small-Sized DNA Fragments in a Glassy Nanopore by Utilization of Crispr-Cas12a as a Converter System

Zhang, S., M. Liu, H. Cui, M.A. Ziaee, R. Sun, L. Chen, D. Chen, D. Garoli, and J. Wang

Analyst, 2022. 147, 905-914

Information-Theoretic Foundations of DNA Data Storage

Shomorony, I. and R. Heckel

Found. Trends Commun. Inf. Theory, 2022. 19, 1-106

High‐Frequency Light Rectification by Nanoscale Plasmonic Conical Antenna in Point‐Contact‐Insulator‐Metal Architecture

Rajeshkumar Mupparapu, Joao Cunha, Francesco Tantussi, Andrea Jacassi, Leopold Summerer, Maddalena Patrini, Andrea Giugni, Lorenzo Maserati, Alessandro Alabastri, Denis Garoli, Remo Proietti Zaccaria

Advanced Energy Materials 12 (15), 2103785 (2022)

Enhanced Optical Spectroscopy for multiplexed DNA and Protein sequencing with Plasmonic Nanopores: challenges and prospects

W. Li, J. Zhou, N. Maccaferri, R. Krahne, W. Kang, and D. Garoli*

Analytical Chemistry 2022, 94, 2, 503–514

Emerging Approaches to DNA Data Storage: Challenges and Prospects

Andrea Doricchi, Casey M. Platnich, Andreas Gimpel, Friederikee Horn, Max Earle, German Lanzavecchia, Aitziber L. Cortajarena, Luis M. Liz-Marzán, Na Liu, Reinhard Heckel, Robert N. Grass, Roman Krahne, Ulrich F. Keyser, and Denis Garoli

ACS Nano 2022, 16 (11), 17552-17571

Emerging Approaches to DNA Data Storage: Challenges and Prospect

Armeni, P. and A. Gatti

ACS Nano, 2022. 16, 19612-19613.

Magnetic control of particle trapping in a plasmonic nanopore

N. Maccaferri, P. Vavassori, and D. Garoli*

Appl. Phys. Lett. 118, 193102 (2021);

Nanoporous Metals: From Plasmonic Properties to Applications in Enhanced Spectroscopy and Photocatalysis

A. N. Koya, X. Zhu, N. Ohannesian, A. Ali Yanik, A. Alabastri, R. Proietti Zaccaria, R. Krahne, W.-C. Shih, and D. Garoli*

ACS Nano 2021, 15, 4, 6038–6060

Patent application for random DNA for cryptography and one way functions

Robert Grass, Reinhard Heckel

PCT/EP2022/059323

Publications

Chiroptical Hybrid Nanomaterials Based on Metal Nanoparticles and Biomolecules

Núñez-Martínez, M., J. Dong, I. García, and L.M. Liz-Marzán

Detection of Protein Oligomers with Nanopores

Horne, R.I., S.E. Sandler, M. Vendruscolo, and U.F. Keyser

Modular Plasmonic Nanopore for Opto-Thermal Gating

Douaki, A., S. Weng, G. Lanzavecchia, A. Sapunova, A. Stuber, G. Nanni, N. Nakatsuka, M. Tsutsui, K. Yokota, R. Krahne, and D. Garoli

Universal Click-Chemistry Approach for the DNA Functionalization of Nanoparticles

Siegel, N., H. Hasebe, G. Chiarelli, D. Garoli, H. Sugimoto, M. Fujii, G.P. Acuna, and K. Kołątaj

Investigation of Ion Transport in Solid-State Nanopores with Different Properties Using Comsol Modeling

Sapunova, A., L. Lin, S. Weng, G. Lanzavecchia, A. Douaki, and R. Krahne

Biomolecular Ligands as Tools to Modulate the Optical and Chiroptical Properties of Gold Nanoclusters

Saa, L., M. Núñez-Martínez, E. Carpintero-Cueto, and A.L. Cortajarena

Chemical Annealing Restructures Rna for Nanopore Detection

Platnich, C.M., M.K. Earle, and U.F. Keyser

Chemical Unclonable Functions Based on Operable Random DNA Pools

Luescher, A.M., A.L. Gimpel, W.J. Stark, R. Heckel, and R.N. Grass

Challenges for Error-Correction Coding in DNA Data Storage: Photolithographic Synthesis and DNA Decay

Gimpel, A.L., W.J. Stark, R. Heckel, and R.N. Grass

Dry Synthesis of Bi-Layer Nanoporous Metal Films as Plasmonic Metamaterial

Caligiuri, V., H. Kwon, A. Griesi, Y.P. Ivanov, A. Schirato, A. Alabastri, M. Cuscunà, G. Balestra, A. De Luca, T. Tapani, H. Lin, N. Maccaferri, R. Krahne, G. Divitini, P. Fischer, and D. Garoli

Recent Advances in DNA Origami-Engineered Nanomaterials and Applications

Zhan, P., A. Peil, Q. Jiang, D. Wang, S. Mousavi, Q. Xiong, Q. Shen, Y. Shang, B. Ding, C. Lin, Y. Ke, and N. Liu

Modulating Lipid Membrane Morphology by Dynamic DNA Origami Networks

Yang, J., K. Jahnke, L. Xin, X. Jing, P. Zhan, A. Peil, A. Griffo, M. Škugor, D. Yang, S. Fan, K. Göpfrich, H. Yan, P. Wang, and N. Liu

Neurotransmitter Sensing Via Ionic Flux Modulation through Aptamer Conformational Rearrangement

Stuber, A., A. Douaki, J. Hengsteler, D. Buckingham, D. Momotenko, D. Garoli, and N. Nakatsuka

Aptamer Conformational Dynamics Modulate Neurotransmitter Sensing in Nanopores

Stuber, A., A. Douaki, J. Hengsteler, D. Buckingham, D. Momotenko, D. Garoli, and N. Nakatsuka

Transformable Plasmonic Helix with Swinging Gold Nanoparticles

Peil, A., P. Zhan, X. Duan, R. Krahne, D. Garoli, L. M. Liz-Marzán, and N. Liu

DNA Volume, Topology, and Flexibility Dictate Nanopore Current Signals

Li, Y., S.E. Sandler, U.F. Keyser, and J. Zhu

Plasmonic Photochemistry as a Tool to Prepare Metallic Nanopores with Controlled Diameter for Optimized detection of single entities

German Lanzavecchia, Joel Kuttruff, Andrea Doricchi, Ali Douaki, Krishnadas Kumaranchira Ramankutty, Isabel García, Lyuye Lin, Alba Viejo Rodríguez, Thomas Wågberg, Roman Krahne, Nicolò Maccaferri, Denis Garoli

Advances in Ultrafast Plasmonics

A digital twin for DNA data storage based on comprehensive quantification of errors and biases

Andreas L Gimpel, Wendelin J Stark, Reinhard Heckel, Robert N Grass

Detection of Small-Sized DNA Fragments in a Glassy Nanopore by Utilization of Crispr-Cas12a as a Converter System

Zhang, S., M. Liu, H. Cui, M.A. Ziaee, R. Sun, L. Chen, D. Chen, D. Garoli, and J. Wang

Information-Theoretic Foundations of DNA Data Storage

Shomorony, I. and R. Heckel

High‐Frequency Light Rectification by Nanoscale Plasmonic Conical Antenna in Point‐Contact‐Insulator‐Metal Architecture

Rajeshkumar Mupparapu, Joao Cunha, Francesco Tantussi, Andrea Jacassi, Leopold Summerer, Maddalena Patrini, Andrea Giugni, Lorenzo Maserati, Alessandro Alabastri, Denis Garoli, Remo Proietti Zaccaria

Enhanced Optical Spectroscopy for multiplexed DNA and Protein sequencing with Plasmonic Nanopores: challenges and prospects

W. Li, J. Zhou, N. Maccaferri, R. Krahne, W. Kang, and D. Garoli*

Emerging Approaches to DNA Data Storage: Challenges and Prospects

Andrea Doricchi, Casey M. Platnich, Andreas Gimpel, Friederikee Horn, Max Earle, German Lanzavecchia, Aitziber L. Cortajarena, Luis M. Liz-Marzán, Na Liu, Reinhard Heckel, Robert N. Grass, Roman Krahne, Ulrich F. Keyser, and Denis Garoli

Emerging Approaches to DNA Data Storage: Challenges and Prospect

Armeni, P. and A. Gatti

Magnetic control of particle trapping in a plasmonic nanopore

N. Maccaferri, P. Vavassori, and D. Garoli*

Nanoporous Metals: From Plasmonic Properties to Applications in Enhanced Spectroscopy and Photocatalysis

A. N. Koya, X. Zhu, N. Ohannesian, A. Ali Yanik, A. Alabastri, R. Proietti Zaccaria, R. Krahne, W.-C. Shih, and D. Garoli*

Patent application for random DNA for cryptography and one way functions

Robert Grass, Reinhard Heckel